PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010909195.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 241aa    MW: 27347.8 Da    PI: 9.4345
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010909195.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1522.7e-47141391128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelvv+yL++k+ + +l++  vi+e+d+ k++PwdLp    ++e e yfFs r+ +y +g+r+nrat sgyWk tgkdk+v+++
  XP_010909195.1  14 LPPGFRFHPTDEELVVQYLRRKAFSWPLPA-AVIPEIDLGKYDPWDLPG--GGSEGEQYFFSLREARYLNGRRHNRATVSGYWKVTGKDKPVIAS 105
                     79***************************9.89***************3..3456799*********************************9987 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++lvglkk+Lvfy+g+ p+g++tdW+mhey l
  XP_010909195.1 106 rCSQLVGLKKVLVFYRGKPPHGSRTDWIMHEYCL 139
                     68899***************************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.24E-569174IPR003441NAC domain
PROSITE profilePS5100554.81314174IPR003441NAC domain
PfamPF023651.9E-2415139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MEKPDFIKYG AMRLPPGFRF HPTDEELVVQ YLRRKAFSWP LPAAVIPEID LGKYDPWDLP  60
GGGSEGEQYF FSLREARYLN GRRHNRATVS GYWKVTGKDK PVIASRCSQL VGLKKVLVFY  120
RGKPPHGSRT DWIMHEYCLA DPETRAFSFS QRKTSPHSSM VPSKDWVVCR IFKKRRATRI  180
DAEITSYYNY SRIQNNNTEP IDPGPSLSSS SSSSSCLTDL SEDGEEGSSH RTASSPNGRE  240
T
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4dul_B1e-481217915170NAC domain-containing protein 19
4dul_A1e-481217915170NAC domain-containing protein 19
1ut7_B1e-481217915170NO APICAL MERISTEM PROTEIN
1ut7_A1e-481217915170NO APICAL MERISTEM PROTEIN
1ut4_B1e-481217915170NO APICAL MERISTEM PROTEIN
1ut4_A1e-481217915170NO APICAL MERISTEM PROTEIN
3swp_D2e-481217918173NAC domain-containing protein 19
3swp_C2e-481217918173NAC domain-containing protein 19
3swp_B2e-481217918173NAC domain-containing protein 19
3swp_A2e-481217918173NAC domain-containing protein 19
3swm_D2e-481217918173NAC domain-containing protein 19
3swm_C2e-481217918173NAC domain-containing protein 19
3swm_B2e-481217918173NAC domain-containing protein 19
3swm_A2e-481217918173NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010909195.10.0PREDICTED: NAC domain-containing protein 18-like
SwissprotQ9FY939e-73NAC83_ARATH; NAC domain-containing protein 83
TrEMBLB3TLL03e-93B3TLL0_ELAGV; ANAC083 transcription factor
STRINGGSMUA_Achr7P22480_0018e-91(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63173254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-73NAC domain containing protein 83